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  3. Hey @bonfire @mayel and crew, if you ever feel like putting a spec down to attach academic citations to #ActivityPub objects for your Open Science Network, ping me.

Hey @bonfire @mayel and crew, if you ever feel like putting a spec down to attach academic citations to #ActivityPub objects for your Open Science Network, ping me.

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  • bonfire@indieweb.socialB bonfire@indieweb.social

    @julian

    Have you also looked at:

    1. https://schema.datacite.org
    2. DOI Kernel Schema
    3. ORCID seems to use CreativeWork from schema.org (we fetch orcid records in JSON but I'd have to double check what schema that's giving us) https://iphylo.blogspot.com/2020/01/orcid-serves-schemaorg-linked-data-via.html

    @mayel @jonny @smallcircles

    trwnh@mastodon.socialT This user is from outside of this forum
    trwnh@mastodon.socialT This user is from outside of this forum
    trwnh@mastodon.social
    wrote on last edited by
    #7

    @bonfire @julian @mayel @jonny @smallcircles

    see also http://purl.org/spar/cito with an explainer at http://www.sparontologies.net/ontologies/cito

    julian@fietkau.socialJ 1 Reply Last reply
    0
    • bonfire@indieweb.socialB bonfire@indieweb.social

      @julian

      That would be great! We anyway want to federate link preview metadata (I see there's https://helge.codeberg.page/fep/fep/8967/ though nobody seems to have implemented it yet) so it'd be great if it was done as an extension of that, so that non-scientific platforms can still show a subset of the preview information at least? And yeah looking to existing schemas to pull in sounds great, maybe we can collaborate on a FEP draft that just points to those and shows some examples?

      @mayel @jonny @smallcircles

      julian@fietkau.socialJ This user is from outside of this forum
      julian@fietkau.socialJ This user is from outside of this forum
      julian@fietkau.social
      wrote on last edited by
      #8

      @bonfire I like FEP-8967, but my intuition is that citation information is kind of orthogonal to link previews. It could well make sense for software to emit/consume both, but if I'm federating an academic article like https://fietkau.science/content_interaction_public_displays, do I want to bundle 25 link previews? It seems incongruent to how those are used. More crucially, not every academic citation will have a URL, it might just be an old book with title + author + publisher + year.

      @mayel @jonny @smallcircles

      bonfire@indieweb.socialB 1 Reply Last reply
      0
      • julian@fietkau.socialJ julian@fietkau.social

        @bonfire I like FEP-8967, but my intuition is that citation information is kind of orthogonal to link previews. It could well make sense for software to emit/consume both, but if I'm federating an academic article like https://fietkau.science/content_interaction_public_displays, do I want to bundle 25 link previews? It seems incongruent to how those are used. More crucially, not every academic citation will have a URL, it might just be an old book with title + author + publisher + year.

        @mayel @jonny @smallcircles

        bonfire@indieweb.socialB This user is from outside of this forum
        bonfire@indieweb.socialB This user is from outside of this forum
        bonfire@indieweb.social
        wrote on last edited by
        #9

        @julian

        ah based on that example we may be talking about different things, so far we've been thinking more of how you would federate and preview the metadata of https://fietkau.science/content_interaction_public_displays (assuming it is a publication or any kind of research object) rather than how you'd federate all the references if that text was published directly on the fediverse... which could be done different but also it could be app to the UI to decide if/how to use/display the link metadata

        @mayel @jonny @smallcircles

        smallcircles@social.coopS julian@fietkau.socialJ 2 Replies Last reply
        0
        • bonfire@indieweb.socialB bonfire@indieweb.social

          @julian

          Have you also looked at:

          1. https://schema.datacite.org
          2. DOI Kernel Schema
          3. ORCID seems to use CreativeWork from schema.org (we fetch orcid records in JSON but I'd have to double check what schema that's giving us) https://iphylo.blogspot.com/2020/01/orcid-serves-schemaorg-linked-data-via.html

          @mayel @jonny @smallcircles

          julian@fietkau.socialJ This user is from outside of this forum
          julian@fietkau.socialJ This user is from outside of this forum
          julian@fietkau.social
          wrote on last edited by
          #10

          @bonfire A bit, yeah. I'm sure each one has pros and cons for the purpose, but I'm in favor of picking something that's ready for use with linked data. We might be able to avoid defining a new JSON-LD context that way.

          schema.org's CreativeWork is a supertype of ScholarlyArticle. Curious why ORCID doesn't use the subtypes even though they have the type information in their own data. (Their JSON schema is altogether different from their JSON-LD I think.)

          @mayel @jonny @smallcircles

          bonfire@indieweb.socialB 1 Reply Last reply
          0
          • bonfire@indieweb.socialB bonfire@indieweb.social

            @julian

            ah based on that example we may be talking about different things, so far we've been thinking more of how you would federate and preview the metadata of https://fietkau.science/content_interaction_public_displays (assuming it is a publication or any kind of research object) rather than how you'd federate all the references if that text was published directly on the fediverse... which could be done different but also it could be app to the UI to decide if/how to use/display the link metadata

            @mayel @jonny @smallcircles

            smallcircles@social.coopS This user is from outside of this forum
            smallcircles@social.coopS This user is from outside of this forum
            smallcircles@social.coop
            wrote on last edited by
            #11

            @julian @bonfire @mayel @jonny

            With #OpenScience we talk of an entire field that has a lot to fight for, given all that's wrong around academic publishing processes and the strangehold of commercial parties.

            Also a field full of people who might design/deliver rock-solid robust & *interoperable* open standard specifications.

            There's ample opportunity to start something like ForgeFed, a dedicated protocol extension spec. Working name: #ScienceFed and it can be homed at https://codeberg.org/fediverse

            trwnh@mastodon.socialT 1 Reply Last reply
            0
            • trwnh@mastodon.socialT trwnh@mastodon.social

              @bonfire @julian @mayel @jonny @smallcircles

              see also http://purl.org/spar/cito with an explainer at http://www.sparontologies.net/ontologies/cito

              julian@fietkau.socialJ This user is from outside of this forum
              julian@fietkau.socialJ This user is from outside of this forum
              julian@fietkau.social
              wrote on last edited by
              #12

              @trwnh Thanks, I hadn't come across this. Nice and detailed. I like that this can encode the type of citation (discusses, summarizes, critiques, ...), I don't love that it does it with a long list of optional properties on the citation object rather than one property with a value range. Feels like it'd be a pain to parse for plain JSON consumers this way. Will think on it more.

              @bonfire @mayel @jonny @smallcircles

              trwnh@mastodon.socialT 1 Reply Last reply
              0
              • julian@fietkau.socialJ julian@fietkau.social

                @trwnh Thanks, I hadn't come across this. Nice and detailed. I like that this can encode the type of citation (discusses, summarizes, critiques, ...), I don't love that it does it with a long list of optional properties on the citation object rather than one property with a value range. Feels like it'd be a pain to parse for plain JSON consumers this way. Will think on it more.

                @bonfire @mayel @jonny @smallcircles

                trwnh@mastodon.socialT This user is from outside of this forum
                trwnh@mastodon.socialT This user is from outside of this forum
                trwnh@mastodon.social
                wrote on last edited by
                #13

                @julian @bonfire @mayel @jonny @smallcircles

                you can reify the citation as a Citation object and then express the type of citation with the hasCitationCharacterization property? see the explainer's first example on "direct form" vs "reified form"

                1 Reply Last reply
                0
                • julian@fietkau.socialJ julian@fietkau.social

                  @bonfire A bit, yeah. I'm sure each one has pros and cons for the purpose, but I'm in favor of picking something that's ready for use with linked data. We might be able to avoid defining a new JSON-LD context that way.

                  schema.org's CreativeWork is a supertype of ScholarlyArticle. Curious why ORCID doesn't use the subtypes even though they have the type information in their own data. (Their JSON schema is altogether different from their JSON-LD I think.)

                  @mayel @jonny @smallcircles

                  bonfire@indieweb.socialB This user is from outside of this forum
                  bonfire@indieweb.socialB This user is from outside of this forum
                  bonfire@indieweb.social
                  wrote on last edited by
                  #14

                  @julian

                  makes sense, though would be great to heard from academics on this, whether involved/informed on the the topic of schemas or not...

                  and thanks for the hint, will have to check if we're getting the regular json version instead of the json-ld one...

                  @mayel @jonny @smallcircles

                  bonfire@indieweb.socialB 1 Reply Last reply
                  0
                  • bonfire@indieweb.socialB bonfire@indieweb.social

                    @julian

                    makes sense, though would be great to heard from academics on this, whether involved/informed on the the topic of schemas or not...

                    and thanks for the hint, will have to check if we're getting the regular json version instead of the json-ld one...

                    @mayel @jonny @smallcircles

                    bonfire@indieweb.socialB This user is from outside of this forum
                    bonfire@indieweb.socialB This user is from outside of this forum
                    bonfire@indieweb.social
                    wrote on last edited by
                    #15

                    Obligatory reference when looking at standards πŸ˜…

                    @julian @mayel @jonny @smallcircles

                    smallcircles@social.coopS 1 Reply Last reply
                    0
                    • bonfire@indieweb.socialB bonfire@indieweb.social

                      Obligatory reference when looking at standards πŸ˜…

                      @julian @mayel @jonny @smallcircles

                      smallcircles@social.coopS This user is from outside of this forum
                      smallcircles@social.coopS This user is from outside of this forum
                      smallcircles@social.coop
                      wrote on last edited by
                      #16

                      @bonfire @julian @mayel @jonny

                      The situation that exists now is that each dev creates their own standard, which is way way worse. πŸ˜…

                      smallcircles@social.coopS 1 Reply Last reply
                      0
                      • smallcircles@social.coopS smallcircles@social.coop

                        @bonfire @julian @mayel @jonny

                        The situation that exists now is that each dev creates their own standard, which is way way worse. πŸ˜…

                        smallcircles@social.coopS This user is from outside of this forum
                        smallcircles@social.coopS This user is from outside of this forum
                        smallcircles@social.coop
                        wrote on last edited by
                        #17

                        @bonfire @julian @mayel @jonny

                        Also btw, this discussion takes place on an ephemeral channel, where after the toot flood everyone goes their own way with different expectations πŸ™‚

                        smallcircles@social.coopS 1 Reply Last reply
                        0
                        • smallcircles@social.coopS smallcircles@social.coop

                          @bonfire @julian @mayel @jonny

                          Also btw, this discussion takes place on an ephemeral channel, where after the toot flood everyone goes their own way with different expectations πŸ™‚

                          smallcircles@social.coopS This user is from outside of this forum
                          smallcircles@social.coopS This user is from outside of this forum
                          smallcircles@social.coop
                          wrote on last edited by
                          #18

                          @bonfire @julian @mayel @jonny

                          At least I will state my interest from the perspective of custodian of Social coding commons movement, which has an ambition that open science becomes seamlessly embedded within the commons with lowest barriers to free knowledge transfer towards broader society and back.

                          The chaordic organization formula that I am pondering allows for pillars to be created around specific themes, to help make them strategically and organically grow over time. Like Open Science.

                          smallcircles@social.coopS 1 Reply Last reply
                          0
                          • bonfire@indieweb.socialB bonfire@indieweb.social

                            @julian

                            ah based on that example we may be talking about different things, so far we've been thinking more of how you would federate and preview the metadata of https://fietkau.science/content_interaction_public_displays (assuming it is a publication or any kind of research object) rather than how you'd federate all the references if that text was published directly on the fediverse... which could be done different but also it could be app to the UI to decide if/how to use/display the link metadata

                            @mayel @jonny @smallcircles

                            julian@fietkau.socialJ This user is from outside of this forum
                            julian@fietkau.socialJ This user is from outside of this forum
                            julian@fietkau.social
                            wrote on last edited by
                            #19

                            @bonfire Right – with OSN you're also thinking about academic creation, not only sharing? So letting authors declaratively cite specific sources in their posts could be good, as would searching/filtering for β€œwhat else cites this”.

                            Although tbh, my motivation for now is interop between Encyclia and OSN. πŸ™‚ I want Bonfire to recognize Encyclia posts as what they are (automated metadata summaries of specific academic works) and separate those from human discussions.

                            @mayel @jonny @smallcircles

                            bonfire@indieweb.socialB 1 Reply Last reply
                            0
                            • smallcircles@social.coopS smallcircles@social.coop

                              @bonfire @julian @mayel @jonny

                              At least I will state my interest from the perspective of custodian of Social coding commons movement, which has an ambition that open science becomes seamlessly embedded within the commons with lowest barriers to free knowledge transfer towards broader society and back.

                              The chaordic organization formula that I am pondering allows for pillars to be created around specific themes, to help make them strategically and organically grow over time. Like Open Science.

                              smallcircles@social.coopS This user is from outside of this forum
                              smallcircles@social.coopS This user is from outside of this forum
                              smallcircles@social.coop
                              wrote on last edited by
                              #20

                              @bonfire @julian @mayel @jonny

                              Oh, I should also mention that I intend to port and reboot https://fedi.foundation which I can also offer as a place where ScienceFed can inform the public about its work.

                              This site is intended to be a multi-author publishing service for participants in Social coding commons, specifically around themes of applied research for the social web of tomorrow.

                              bonfire@indieweb.socialB 1 Reply Last reply
                              0
                              • smallcircles@social.coopS smallcircles@social.coop

                                @bonfire @julian @mayel @jonny

                                Oh, I should also mention that I intend to port and reboot https://fedi.foundation which I can also offer as a place where ScienceFed can inform the public about its work.

                                This site is intended to be a multi-author publishing service for participants in Social coding commons, specifically around themes of applied research for the social web of tomorrow.

                                bonfire@indieweb.socialB This user is from outside of this forum
                                bonfire@indieweb.socialB This user is from outside of this forum
                                bonfire@indieweb.social
                                wrote on last edited by
                                #21

                                @smallcircles @julian @mayel @jonny does it federate?

                                1 Reply Last reply
                                0
                                • julian@fietkau.socialJ julian@fietkau.social

                                  @bonfire Right – with OSN you're also thinking about academic creation, not only sharing? So letting authors declaratively cite specific sources in their posts could be good, as would searching/filtering for β€œwhat else cites this”.

                                  Although tbh, my motivation for now is interop between Encyclia and OSN. πŸ™‚ I want Bonfire to recognize Encyclia posts as what they are (automated metadata summaries of specific academic works) and separate those from human discussions.

                                  @mayel @jonny @smallcircles

                                  bonfire@indieweb.socialB This user is from outside of this forum
                                  bonfire@indieweb.socialB This user is from outside of this forum
                                  bonfire@indieweb.social
                                  wrote on last edited by
                                  #22

                                  @julian

                                  That should be easy enough to get working as-is to begin with, and we can then progressively enhance with schemas?

                                  @mayel @jonny @smallcircles

                                  1 Reply Last reply
                                  0
                                  • smallcircles@social.coopS smallcircles@social.coop

                                    @julian @bonfire @mayel @jonny

                                    With #OpenScience we talk of an entire field that has a lot to fight for, given all that's wrong around academic publishing processes and the strangehold of commercial parties.

                                    Also a field full of people who might design/deliver rock-solid robust & *interoperable* open standard specifications.

                                    There's ample opportunity to start something like ForgeFed, a dedicated protocol extension spec. Working name: #ScienceFed and it can be homed at https://codeberg.org/fediverse

                                    trwnh@mastodon.socialT This user is from outside of this forum
                                    trwnh@mastodon.socialT This user is from outside of this forum
                                    trwnh@mastodon.social
                                    wrote on last edited by
                                    #23

                                    @smallcircles @julian @bonfire @mayel @jonny

                                    for illustrative examples, see https://linkedresearch.org/calls#contributions-and-review and https://csarven.ca/linked-data-notifications

                                    go ahead, inspect the html, try to fetch it as json-ld, the works πŸ™‚

                                    jonny@neuromatch.socialJ 1 Reply Last reply
                                    0
                                    • trwnh@mastodon.socialT trwnh@mastodon.social

                                      @smallcircles @julian @bonfire @mayel @jonny

                                      for illustrative examples, see https://linkedresearch.org/calls#contributions-and-review and https://csarven.ca/linked-data-notifications

                                      go ahead, inspect the html, try to fetch it as json-ld, the works πŸ™‚

                                      jonny@neuromatch.socialJ This user is from outside of this forum
                                      jonny@neuromatch.socialJ This user is from outside of this forum
                                      jonny@neuromatch.social
                                      wrote on last edited by
                                      #24

                                      @trwnh
                                      @smallcircles @julian @bonfire @mayel
                                      Ya ya. Adding LD to documents is easy. Making use of it at scale is hard.

                                      trwnh@mastodon.socialT 1 Reply Last reply
                                      0
                                      • jonny@neuromatch.socialJ jonny@neuromatch.social

                                        @trwnh
                                        @smallcircles @julian @bonfire @mayel
                                        Ya ya. Adding LD to documents is easy. Making use of it at scale is hard.

                                        trwnh@mastodon.socialT This user is from outside of this forum
                                        trwnh@mastodon.socialT This user is from outside of this forum
                                        trwnh@mastodon.social
                                        wrote on last edited by
                                        #25

                                        @jonny @smallcircles @julian @bonfire @mayel i am finding that the challenge isn't so much "making use of it as scale" as it is specifically "being understood at scale". it's a problem that we have even with natural language. you have the capability to make use of information that you understand, but it's the understanding that's the hard part. and also discovering that information in the first place, and being able to find it when you need it. compared to that, use cases are straightforward.

                                        jonny@neuromatch.socialJ 1 Reply Last reply
                                        0
                                        • trwnh@mastodon.socialT trwnh@mastodon.social

                                          @jonny @smallcircles @julian @bonfire @mayel i am finding that the challenge isn't so much "making use of it as scale" as it is specifically "being understood at scale". it's a problem that we have even with natural language. you have the capability to make use of information that you understand, but it's the understanding that's the hard part. and also discovering that information in the first place, and being able to find it when you need it. compared to that, use cases are straightforward.

                                          jonny@neuromatch.socialJ This user is from outside of this forum
                                          jonny@neuromatch.socialJ This user is from outside of this forum
                                          jonny@neuromatch.social
                                          wrote on last edited by
                                          #26

                                          @trwnh
                                          @smallcircles @julian @bonfire @mayel
                                          I think basically we are saying the same thing because understanding is a prerequisite to use for me πŸ™‚ so yes, agreed.

                                          jonny@neuromatch.socialJ 1 Reply Last reply
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