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  3. Hey @bonfire @mayel and crew, if you ever feel like putting a spec down to attach academic citations to #ActivityPub objects for your Open Science Network, ping me.

Hey @bonfire @mayel and crew, if you ever feel like putting a spec down to attach academic citations to #ActivityPub objects for your Open Science Network, ping me.

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  • julian@fietkau.socialJ julian@fietkau.social

    @bonfire I like FEP-8967, but my intuition is that citation information is kind of orthogonal to link previews. It could well make sense for software to emit/consume both, but if I'm federating an academic article like https://fietkau.science/content_interaction_public_displays, do I want to bundle 25 link previews? It seems incongruent to how those are used. More crucially, not every academic citation will have a URL, it might just be an old book with title + author + publisher + year.

    @mayel @jonny @smallcircles

    bonfire@indieweb.socialB This user is from outside of this forum
    bonfire@indieweb.socialB This user is from outside of this forum
    bonfire@indieweb.social
    wrote on last edited by
    #9

    @julian

    ah based on that example we may be talking about different things, so far we've been thinking more of how you would federate and preview the metadata of https://fietkau.science/content_interaction_public_displays (assuming it is a publication or any kind of research object) rather than how you'd federate all the references if that text was published directly on the fediverse... which could be done different but also it could be app to the UI to decide if/how to use/display the link metadata

    @mayel @jonny @smallcircles

    smallcircles@social.coopS julian@fietkau.socialJ 2 Replies Last reply
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    • bonfire@indieweb.socialB bonfire@indieweb.social

      @julian

      Have you also looked at:

      1. https://schema.datacite.org
      2. DOI Kernel Schema
      3. ORCID seems to use CreativeWork from schema.org (we fetch orcid records in JSON but I'd have to double check what schema that's giving us) https://iphylo.blogspot.com/2020/01/orcid-serves-schemaorg-linked-data-via.html

      @mayel @jonny @smallcircles

      julian@fietkau.socialJ This user is from outside of this forum
      julian@fietkau.socialJ This user is from outside of this forum
      julian@fietkau.social
      wrote on last edited by
      #10

      @bonfire A bit, yeah. I'm sure each one has pros and cons for the purpose, but I'm in favor of picking something that's ready for use with linked data. We might be able to avoid defining a new JSON-LD context that way.

      schema.org's CreativeWork is a supertype of ScholarlyArticle. Curious why ORCID doesn't use the subtypes even though they have the type information in their own data. (Their JSON schema is altogether different from their JSON-LD I think.)

      @mayel @jonny @smallcircles

      bonfire@indieweb.socialB 1 Reply Last reply
      0
      • bonfire@indieweb.socialB bonfire@indieweb.social

        @julian

        ah based on that example we may be talking about different things, so far we've been thinking more of how you would federate and preview the metadata of https://fietkau.science/content_interaction_public_displays (assuming it is a publication or any kind of research object) rather than how you'd federate all the references if that text was published directly on the fediverse... which could be done different but also it could be app to the UI to decide if/how to use/display the link metadata

        @mayel @jonny @smallcircles

        smallcircles@social.coopS This user is from outside of this forum
        smallcircles@social.coopS This user is from outside of this forum
        smallcircles@social.coop
        wrote on last edited by
        #11

        @julian @bonfire @mayel @jonny

        With #OpenScience we talk of an entire field that has a lot to fight for, given all that's wrong around academic publishing processes and the strangehold of commercial parties.

        Also a field full of people who might design/deliver rock-solid robust & *interoperable* open standard specifications.

        There's ample opportunity to start something like ForgeFed, a dedicated protocol extension spec. Working name: #ScienceFed and it can be homed at https://codeberg.org/fediverse

        trwnh@mastodon.socialT 1 Reply Last reply
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        • trwnh@mastodon.socialT trwnh@mastodon.social

          @bonfire @julian @mayel @jonny @smallcircles

          see also http://purl.org/spar/cito with an explainer at http://www.sparontologies.net/ontologies/cito

          julian@fietkau.socialJ This user is from outside of this forum
          julian@fietkau.socialJ This user is from outside of this forum
          julian@fietkau.social
          wrote on last edited by
          #12

          @trwnh Thanks, I hadn't come across this. Nice and detailed. I like that this can encode the type of citation (discusses, summarizes, critiques, ...), I don't love that it does it with a long list of optional properties on the citation object rather than one property with a value range. Feels like it'd be a pain to parse for plain JSON consumers this way. Will think on it more.

          @bonfire @mayel @jonny @smallcircles

          trwnh@mastodon.socialT 1 Reply Last reply
          0
          • julian@fietkau.socialJ julian@fietkau.social

            @trwnh Thanks, I hadn't come across this. Nice and detailed. I like that this can encode the type of citation (discusses, summarizes, critiques, ...), I don't love that it does it with a long list of optional properties on the citation object rather than one property with a value range. Feels like it'd be a pain to parse for plain JSON consumers this way. Will think on it more.

            @bonfire @mayel @jonny @smallcircles

            trwnh@mastodon.socialT This user is from outside of this forum
            trwnh@mastodon.socialT This user is from outside of this forum
            trwnh@mastodon.social
            wrote on last edited by
            #13

            @julian @bonfire @mayel @jonny @smallcircles

            you can reify the citation as a Citation object and then express the type of citation with the hasCitationCharacterization property? see the explainer's first example on "direct form" vs "reified form"

            1 Reply Last reply
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            • julian@fietkau.socialJ julian@fietkau.social

              @bonfire A bit, yeah. I'm sure each one has pros and cons for the purpose, but I'm in favor of picking something that's ready for use with linked data. We might be able to avoid defining a new JSON-LD context that way.

              schema.org's CreativeWork is a supertype of ScholarlyArticle. Curious why ORCID doesn't use the subtypes even though they have the type information in their own data. (Their JSON schema is altogether different from their JSON-LD I think.)

              @mayel @jonny @smallcircles

              bonfire@indieweb.socialB This user is from outside of this forum
              bonfire@indieweb.socialB This user is from outside of this forum
              bonfire@indieweb.social
              wrote on last edited by
              #14

              @julian

              makes sense, though would be great to heard from academics on this, whether involved/informed on the the topic of schemas or not...

              and thanks for the hint, will have to check if we're getting the regular json version instead of the json-ld one...

              @mayel @jonny @smallcircles

              bonfire@indieweb.socialB 1 Reply Last reply
              0
              • bonfire@indieweb.socialB bonfire@indieweb.social

                @julian

                makes sense, though would be great to heard from academics on this, whether involved/informed on the the topic of schemas or not...

                and thanks for the hint, will have to check if we're getting the regular json version instead of the json-ld one...

                @mayel @jonny @smallcircles

                bonfire@indieweb.socialB This user is from outside of this forum
                bonfire@indieweb.socialB This user is from outside of this forum
                bonfire@indieweb.social
                wrote on last edited by
                #15

                Obligatory reference when looking at standards πŸ˜…

                @julian @mayel @jonny @smallcircles

                smallcircles@social.coopS 1 Reply Last reply
                0
                • bonfire@indieweb.socialB bonfire@indieweb.social

                  Obligatory reference when looking at standards πŸ˜…

                  @julian @mayel @jonny @smallcircles

                  smallcircles@social.coopS This user is from outside of this forum
                  smallcircles@social.coopS This user is from outside of this forum
                  smallcircles@social.coop
                  wrote on last edited by
                  #16

                  @bonfire @julian @mayel @jonny

                  The situation that exists now is that each dev creates their own standard, which is way way worse. πŸ˜…

                  smallcircles@social.coopS 1 Reply Last reply
                  0
                  • smallcircles@social.coopS smallcircles@social.coop

                    @bonfire @julian @mayel @jonny

                    The situation that exists now is that each dev creates their own standard, which is way way worse. πŸ˜…

                    smallcircles@social.coopS This user is from outside of this forum
                    smallcircles@social.coopS This user is from outside of this forum
                    smallcircles@social.coop
                    wrote on last edited by
                    #17

                    @bonfire @julian @mayel @jonny

                    Also btw, this discussion takes place on an ephemeral channel, where after the toot flood everyone goes their own way with different expectations πŸ™‚

                    smallcircles@social.coopS 1 Reply Last reply
                    0
                    • smallcircles@social.coopS smallcircles@social.coop

                      @bonfire @julian @mayel @jonny

                      Also btw, this discussion takes place on an ephemeral channel, where after the toot flood everyone goes their own way with different expectations πŸ™‚

                      smallcircles@social.coopS This user is from outside of this forum
                      smallcircles@social.coopS This user is from outside of this forum
                      smallcircles@social.coop
                      wrote on last edited by
                      #18

                      @bonfire @julian @mayel @jonny

                      At least I will state my interest from the perspective of custodian of Social coding commons movement, which has an ambition that open science becomes seamlessly embedded within the commons with lowest barriers to free knowledge transfer towards broader society and back.

                      The chaordic organization formula that I am pondering allows for pillars to be created around specific themes, to help make them strategically and organically grow over time. Like Open Science.

                      smallcircles@social.coopS 1 Reply Last reply
                      0
                      • bonfire@indieweb.socialB bonfire@indieweb.social

                        @julian

                        ah based on that example we may be talking about different things, so far we've been thinking more of how you would federate and preview the metadata of https://fietkau.science/content_interaction_public_displays (assuming it is a publication or any kind of research object) rather than how you'd federate all the references if that text was published directly on the fediverse... which could be done different but also it could be app to the UI to decide if/how to use/display the link metadata

                        @mayel @jonny @smallcircles

                        julian@fietkau.socialJ This user is from outside of this forum
                        julian@fietkau.socialJ This user is from outside of this forum
                        julian@fietkau.social
                        wrote on last edited by
                        #19

                        @bonfire Right – with OSN you're also thinking about academic creation, not only sharing? So letting authors declaratively cite specific sources in their posts could be good, as would searching/filtering for β€œwhat else cites this”.

                        Although tbh, my motivation for now is interop between Encyclia and OSN. πŸ™‚ I want Bonfire to recognize Encyclia posts as what they are (automated metadata summaries of specific academic works) and separate those from human discussions.

                        @mayel @jonny @smallcircles

                        bonfire@indieweb.socialB 1 Reply Last reply
                        0
                        • smallcircles@social.coopS smallcircles@social.coop

                          @bonfire @julian @mayel @jonny

                          At least I will state my interest from the perspective of custodian of Social coding commons movement, which has an ambition that open science becomes seamlessly embedded within the commons with lowest barriers to free knowledge transfer towards broader society and back.

                          The chaordic organization formula that I am pondering allows for pillars to be created around specific themes, to help make them strategically and organically grow over time. Like Open Science.

                          smallcircles@social.coopS This user is from outside of this forum
                          smallcircles@social.coopS This user is from outside of this forum
                          smallcircles@social.coop
                          wrote on last edited by
                          #20

                          @bonfire @julian @mayel @jonny

                          Oh, I should also mention that I intend to port and reboot https://fedi.foundation which I can also offer as a place where ScienceFed can inform the public about its work.

                          This site is intended to be a multi-author publishing service for participants in Social coding commons, specifically around themes of applied research for the social web of tomorrow.

                          bonfire@indieweb.socialB 1 Reply Last reply
                          0
                          • smallcircles@social.coopS smallcircles@social.coop

                            @bonfire @julian @mayel @jonny

                            Oh, I should also mention that I intend to port and reboot https://fedi.foundation which I can also offer as a place where ScienceFed can inform the public about its work.

                            This site is intended to be a multi-author publishing service for participants in Social coding commons, specifically around themes of applied research for the social web of tomorrow.

                            bonfire@indieweb.socialB This user is from outside of this forum
                            bonfire@indieweb.socialB This user is from outside of this forum
                            bonfire@indieweb.social
                            wrote on last edited by
                            #21

                            @smallcircles @julian @mayel @jonny does it federate?

                            1 Reply Last reply
                            0
                            • julian@fietkau.socialJ julian@fietkau.social

                              @bonfire Right – with OSN you're also thinking about academic creation, not only sharing? So letting authors declaratively cite specific sources in their posts could be good, as would searching/filtering for β€œwhat else cites this”.

                              Although tbh, my motivation for now is interop between Encyclia and OSN. πŸ™‚ I want Bonfire to recognize Encyclia posts as what they are (automated metadata summaries of specific academic works) and separate those from human discussions.

                              @mayel @jonny @smallcircles

                              bonfire@indieweb.socialB This user is from outside of this forum
                              bonfire@indieweb.socialB This user is from outside of this forum
                              bonfire@indieweb.social
                              wrote on last edited by
                              #22

                              @julian

                              That should be easy enough to get working as-is to begin with, and we can then progressively enhance with schemas?

                              @mayel @jonny @smallcircles

                              1 Reply Last reply
                              0
                              • smallcircles@social.coopS smallcircles@social.coop

                                @julian @bonfire @mayel @jonny

                                With #OpenScience we talk of an entire field that has a lot to fight for, given all that's wrong around academic publishing processes and the strangehold of commercial parties.

                                Also a field full of people who might design/deliver rock-solid robust & *interoperable* open standard specifications.

                                There's ample opportunity to start something like ForgeFed, a dedicated protocol extension spec. Working name: #ScienceFed and it can be homed at https://codeberg.org/fediverse

                                trwnh@mastodon.socialT This user is from outside of this forum
                                trwnh@mastodon.socialT This user is from outside of this forum
                                trwnh@mastodon.social
                                wrote on last edited by
                                #23

                                @smallcircles @julian @bonfire @mayel @jonny

                                for illustrative examples, see https://linkedresearch.org/calls#contributions-and-review and https://csarven.ca/linked-data-notifications

                                go ahead, inspect the html, try to fetch it as json-ld, the works πŸ™‚

                                jonny@neuromatch.socialJ 1 Reply Last reply
                                0
                                • trwnh@mastodon.socialT trwnh@mastodon.social

                                  @smallcircles @julian @bonfire @mayel @jonny

                                  for illustrative examples, see https://linkedresearch.org/calls#contributions-and-review and https://csarven.ca/linked-data-notifications

                                  go ahead, inspect the html, try to fetch it as json-ld, the works πŸ™‚

                                  jonny@neuromatch.socialJ This user is from outside of this forum
                                  jonny@neuromatch.socialJ This user is from outside of this forum
                                  jonny@neuromatch.social
                                  wrote on last edited by
                                  #24

                                  @trwnh
                                  @smallcircles @julian @bonfire @mayel
                                  Ya ya. Adding LD to documents is easy. Making use of it at scale is hard.

                                  trwnh@mastodon.socialT 1 Reply Last reply
                                  0
                                  • jonny@neuromatch.socialJ jonny@neuromatch.social

                                    @trwnh
                                    @smallcircles @julian @bonfire @mayel
                                    Ya ya. Adding LD to documents is easy. Making use of it at scale is hard.

                                    trwnh@mastodon.socialT This user is from outside of this forum
                                    trwnh@mastodon.socialT This user is from outside of this forum
                                    trwnh@mastodon.social
                                    wrote on last edited by
                                    #25

                                    @jonny @smallcircles @julian @bonfire @mayel i am finding that the challenge isn't so much "making use of it as scale" as it is specifically "being understood at scale". it's a problem that we have even with natural language. you have the capability to make use of information that you understand, but it's the understanding that's the hard part. and also discovering that information in the first place, and being able to find it when you need it. compared to that, use cases are straightforward.

                                    jonny@neuromatch.socialJ 1 Reply Last reply
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                                    • trwnh@mastodon.socialT trwnh@mastodon.social

                                      @jonny @smallcircles @julian @bonfire @mayel i am finding that the challenge isn't so much "making use of it as scale" as it is specifically "being understood at scale". it's a problem that we have even with natural language. you have the capability to make use of information that you understand, but it's the understanding that's the hard part. and also discovering that information in the first place, and being able to find it when you need it. compared to that, use cases are straightforward.

                                      jonny@neuromatch.socialJ This user is from outside of this forum
                                      jonny@neuromatch.socialJ This user is from outside of this forum
                                      jonny@neuromatch.social
                                      wrote on last edited by
                                      #26

                                      @trwnh
                                      @smallcircles @julian @bonfire @mayel
                                      I think basically we are saying the same thing because understanding is a prerequisite to use for me πŸ™‚ so yes, agreed.

                                      jonny@neuromatch.socialJ 1 Reply Last reply
                                      0
                                      • jonny@neuromatch.socialJ jonny@neuromatch.social

                                        @trwnh
                                        @smallcircles @julian @bonfire @mayel
                                        I think basically we are saying the same thing because understanding is a prerequisite to use for me πŸ™‚ so yes, agreed.

                                        jonny@neuromatch.socialJ This user is from outside of this forum
                                        jonny@neuromatch.socialJ This user is from outside of this forum
                                        jonny@neuromatch.social
                                        wrote on last edited by
                                        #27

                                        @trwnh
                                        As a side note, I think RDFa is a great idea, I tried to use it in a document and make a markdown preprocessor to be able to use it with semantic mediawiki-style wikilinks [[predicate::object|display text]] where the document is the implicit subject, or [[subject::predicate::object]] and have those render out as a elements with RDFa. But then I learned that rdflib had dropped support and there weren't any actively developed parsers, so I gave up because I wasn't gonna write one and what's the point in writing something that can't be parsed easily.

                                        trwnh@mastodon.socialT 1 Reply Last reply
                                        0
                                        • jonny@neuromatch.socialJ jonny@neuromatch.social

                                          @trwnh
                                          As a side note, I think RDFa is a great idea, I tried to use it in a document and make a markdown preprocessor to be able to use it with semantic mediawiki-style wikilinks [[predicate::object|display text]] where the document is the implicit subject, or [[subject::predicate::object]] and have those render out as a elements with RDFa. But then I learned that rdflib had dropped support and there weren't any actively developed parsers, so I gave up because I wasn't gonna write one and what's the point in writing something that can't be parsed easily.

                                          trwnh@mastodon.socialT This user is from outside of this forum
                                          trwnh@mastodon.socialT This user is from outside of this forum
                                          trwnh@mastodon.social
                                          wrote on last edited by
                                          #28

                                          @jonny depending on how things go, i might end up writing one for myself if i decide i want to use html as a canonical content format which gets converted into other serializations. i'm not particularly enamored with markdown as a canonical content format (although i recognize why many people like it) so i don't know how much energy to devote to markdown extensions if i won't end up using them

                                          but i still have research to do re: content modeling and management...

                                          trwnh@mastodon.socialT jonny@neuromatch.socialJ 2 Replies Last reply
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